Tyrone Lee

I've cleaned the R library and installed from a CRAN mirror. Issue persists. ```R > install.packages('duckdb', repos = c('https://cloud.r-project.org'), force=TRUE) Installing package into ‘C:/Users/bigcr/localFiles/R/win-library’ (as ‘lib’ is unspecified) trying URL...

```R >file.exists("C:\\Users\\bigcr\\AppData\\Roaming\\R\\data\\R\\duckdb\\.duckdb\\extensions\\v0.8.1\\windows_amd64_rtools\\httpfs.duckdb_extension") [1] TRUE ``` Installing using downloaded zip file from https://extensions.duckdb.org/v0.8.1/windows_amd64/httpfs.duckdb_extension.gz yields the same error. Rtools43 and the devtools library are installed in the default dir `C:\rtools43`. ```R >...

Another update, found a similar error in R 4.2.1 on linux. Perhaps this is an error in `dbExecute`? ```R library(DBI) library(duckdb) con

I want to piggyback off this issue. My question was how difficult it would be to be able to wrap Gos(ling) visualization outputs in a `htmlwidget` such that these visualizations...

https://github.com/evolutionaryscale/esm/blob/41af605958e79daea9d7e9b7512503a1f23b36b1/esm/models/vqvae.py#L422C1-L427C10

I don't see a way to run Soloseq for multimer prediction.

How does this account for the location of the weights? The AF3 code is on creative commons license but the weights are their own weird legal framework which requires attestation...

Lots of downstream updates necessary. Need to change input handling for 3 workflows in this pipeline. Might revisit with nf-schema 2.4

Ignore my earlier comment, i realize some of the dev branches have already migrated to the latest nf-tools version.

https://github.com/nf-core/proteinfold/pull/269