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ImportError: ~/src/ASE_ANI/lib/libboost_python.so.1.63.0: undefined symbol: _Py_fopen

Open UnixJunkie opened this issue 2 years ago • 4 comments

# ./test.sh 
Traceback (most recent call last):
  File "~/src/ASE_ANI/examples/ani_quicktest.py", line 6, in <module>
    from ase_interface import ANIENS
  File "~/src/ASE_ANI/lib/ase_interface.py", line 20, in <module>
    import pyNeuroChem as pync
ImportError: ~/src/ASE_ANI/lib/libboost_python.so.1.63.0: undefined symbol: _Py_fopen

UnixJunkie avatar Sep 26 '23 02:09 UnixJunkie

Can reproduce by:

#!/bin/bash

export PATH=/usr/local/cuda-9.2/bin:${PATH}

export LD_LIBRARY_PATH=/usr/local/cuda-9.2/lib64:${HOME}/src/ASE_ANI/lib:${LD_LIBRARY_PATH}

export PYTHONPATH=${HOME}/src/ASE_ANI/lib:${PYTHONPATH}

source bashrc_example.sh

python3 examples/ani_quicktest.py 

UnixJunkie avatar Sep 26 '23 02:09 UnixJunkie

The cluster node I am using uses Ubuntu 22.04.3 LTS; if that helps.

UnixJunkie avatar Sep 26 '23 02:09 UnixJunkie

I am stuck with this one; any help very welcome.

UnixJunkie avatar Sep 26 '23 02:09 UnixJunkie

well, time to unwatch this repo

proteneer avatar Sep 26 '23 03:09 proteneer