napari-imagej
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imagej
Use ImageJ functionality from napari
The TrackMate XML reader is super slick. Why can't we also do one that uses the `IOService`? Looking at the `trackMate_reader.py` code, it looks flexible enough, and on the Java...
From @elevans: > This make me feel like we should have an area in the side panel that reports what the current image dimensions are and if any labels are...
* Open a single-plane image (e.g. Brick) in napari. * Send it to ImageJ. * Draw on the ImageJ window with the paintbrush tool. * Return to napari and toggle...
In ImageJ2, when executing a SciJava module and harvesting the inputs, the `SaveInputsPreprocessor` takes care to persist the values, and the `LoadInputsPreprocessor` takes care to read and populate them the...
When entering values of type double, float, and BigDecimal, the widget currently limits text entry to two digits after the decimal point. This makes it impossible to enter precise floating...
In the `Example_Script.js`, there are a couple of character inputs. They should ideally be bounded such that only a single character can be specified, but in practice magic_gui currently allows...
* Open a JPG in napari * Send it to ImageJ using the advanced transfer button, fixing the dimensions to be correct (YXC) * Observe that even though the dimensions...
When running a computer op, the awesome New button lets you make a new output image, which is by default dimensioned the same as the input image. But the default...
Even for numbers that are not supposed to be bounded, they are hardcoded to [0, 1000) as min/max bounds. For example, the bundled `Example_Script.js` has many numeric inputs of various...
The JVM's default max heap varies by OpenJDK version, but is typically rather small compared to the size of memory on a computer. For example, I ran out of memory...