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Published 20 hours ago • verified publisher icon googlegenomics

Refactor ShardedBAMWriting for easier reuse

Open iliat opened this issue 10 years ago • 0 comments

Once https://github.com/googlegenomics/dataflow-java/pull/140 is in, refactor the ShardedBAMWriting.java into several classes for easier reuse in other pipelines. Should be pretty easy since the code is already separated into inner classes. Also, port isUnmapped(Read) into utils-java. Also, add exponential backoff to GCS calls.

iliat avatar Sep 07 '15 00:09 iliat