MIScnn icon indicating copy to clipboard operation
MIScnn copied to clipboard

Published 20 hours ago • verified publisher icon frankkramer-lab

using MISCNN in BRATS

Open bhralz opened this issue 4 years ago • 3 comments

Hi,

is there any sample code such as kits19 for brats2020 ? actually if there is such a code, it can be a good backbone for huge number of modifications! please supply that if possible (at least how it can be used for reading brats data!) Thanks

bhralz avatar Jun 20 '21 11:06 bhralz

Hello @bhralzz,

a student in our lab is currently working on a JupyterNotebook example for BRATS19 for his bachelor thesis. I am planing to upload it to the GitHub repository after the marking process, so probably in a few weeks.

But right now, we don't offer any BRATS example application. However, you are welcome to contribute if you want to create one for BRATS20! :)

Cheers, Dominik

PS: Please do not open up an issue and simultaneously an email to me, due to this will lead to a larger overhead in terms of response time.

muellerdo avatar Jun 21 '21 08:06 muellerdo

That's great. The notebooks are great starting points for using the library. Looking forward to it.

marcmorcos avatar Sep 28 '21 19:09 marcmorcos

Check out this:

  • https://github.com/frankkramer-lab/MIScnn/blob/master/examples/BraTS2020.ipynb
  • https://github.com/frankkramer-lab/MIScnn/blob/master/examples/BraTS2020.multimodal.ipynb

muellerdo avatar Oct 19 '21 09:10 muellerdo