Unable To Run cmake after installing packages

[JinLi711]

Bug Description

[A clear, concise description of the bug]

After installing all the packages with vcpkg, I'm running:

cmake .. \
    -DCMAKE_BUILD_TYPE=Release \
    -DFL_BUILD_ARRAYFIRE=ON \
    -DCMAKE_TOOLCHAIN_FILE=/flashlight/vcpkg/scripts/buildsystems/vcpkg.cmake

And here's my error output:

-- The CXX compiler identification is GNU 9.4.0
-- The C compiler identification is GNU 9.4.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Performing Test COMPILER_SUPPORTS_RDYNAMIC
-- Performing Test COMPILER_SUPPORTS_RDYNAMIC - Success
-- -rdynamic supported.
-- Looking for CL_VERSION_2_2
-- Looking for CL_VERSION_2_2 - not found
-- Looking for CL_VERSION_2_1
-- Looking for CL_VERSION_2_1 - not found
-- Looking for CL_VERSION_2_0
-- Looking for CL_VERSION_2_0 - not found
-- Looking for CL_VERSION_1_2
-- Looking for CL_VERSION_1_2 - not found
-- Looking for CL_VERSION_1_1
-- Looking for CL_VERSION_1_1 - not found
-- Looking for CL_VERSION_1_0
-- Looking for CL_VERSION_1_0 - not found
-- Could NOT find OpenCL (missing: OpenCL_LIBRARY OpenCL_INCLUDE_DIR)
-- Found GTest: /flashlight/vcpkg/installed/x64-linux/share/gtest/GTestConfig.cmake (found suitable version "1.12.1", minimum required is "1.10.0")
-- gtest found: (include: , lib: GTest::gtest;GTest::gtest_main
-- Found gtest and gmock on system.
-- Found Threads: TRUE
-- Will build flashlight core and extensions.
-- Could NOT find cereal (missing: cereal_INCLUDE_DIRS)
-- Found cereal (include: )
-- cereal NOT found. Will download from source
-- Will build flashlight contrib assets.
-- ArrayFire found (include: /flashlight/vcpkg/installed/x64-linux/include, library: ArrayFire::afcpu)
-- oneDNN found
-- MKL_THREADING = OMP
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of void*
-- Check size of void* - done
-- Checking for [mkl_intel_lp64 - mkl_gnu_thread - mkl_core - gomp - pthread - m - dl]
--   Library mkl_intel_lp64: /opt/intel/mkl/lib/intel64/libmkl_intel_lp64.so
--   Library mkl_gnu_thread: /opt/intel/mkl/lib/intel64/libmkl_gnu_thread.so
--   Library mkl_core: /opt/intel/mkl/lib/intel64/libmkl_core.so
--   Library gomp: -fopenmp
--   Library pthread: /usr/lib/x86_64-linux-gnu/libpthread.so
--   Library m: /usr/lib/x86_64-linux-gnu/libm.so
--   Library dl: /usr/lib/x86_64-linux-gnu/libdl.so
-- Looking for cblas_sgemm
-- Looking for cblas_sgemm - found
-- MKL library found
-- Looking for C++ include filesystem
-- Looking for C++ include filesystem - found
-- Performing Test CXX_FILESYSTEM_NO_LINK_NEEDED
-- Performing Test CXX_FILESYSTEM_NO_LINK_NEEDED - Success
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.1")
-- CUDNN libname: libcudnn.so;libcudnn.dylib;cudnn64
-- Could NOT find CUDNN (missing: CUDNN_LIBRARY) (Required is at least version "7.1")
-- Found MPI_C: /flashlight/vcpkg/installed/x64-linux/lib/libmpi.so (found version "3.1")
-- Found MPI_CXX: /flashlight/vcpkg/installed/x64-linux/lib/libmpi.so (found version "3.1")
-- Found MPI: TRUE (found version "3.1")
-- MPI_VERSION found:  3.1
-- MPI_CXX found
-- MPI_CXX compile flags: -pthread
-- MPI_CXX include path: /flashlight/vcpkg/installed/x64-linux/include
-- MPI_CXX LINK flags path: -Wl,-rpath -Wl,/flashlight/vcpkg/installed/x64-linux/lib -Wl,--enable-new-dtags -pthread
-- MPI_CXX libraries: /flashlight/vcpkg/installed/x64-linux/lib/libmpi.so
-- MPI_C found
-- MPI_C compile flags: -pthread
-- MPI_C include path: /flashlight/vcpkg/installed/x64-linux/include
-- MPI_C LINK flags path: -Wl,-rpath -Wl,/flashlight/vcpkg/installed/x64-linux/lib -Wl,--enable-new-dtags -pthread
-- MPI_C libraries: /flashlight/vcpkg/installed/x64-linux/lib/libmpi.so
-- using distributed stub
-- Configuring done
CMake Error in CMakeLists.txt:
  Target "flashlight" INTERFACE_INCLUDE_DIRECTORIES property contains path:

    "/flashlight/vcpkg/installed/x64-linux/include"

  which is prefixed in the source directory.


CMake Error in CMakeLists.txt:
  Target "flashlight" INTERFACE_INCLUDE_DIRECTORIES property contains path:

    "/flashlight/vcpkg/installed/x64-linux/include"

  which is prefixed in the source directory.


-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:

    FL_BUILD_ARRAYFIRE


CMake Generate step failed.  Build files cannot be regenerated correctly.

What's the best way to resolve this issue?

Platform and Hardware

[Please list your operating system, [GPU] hardware, compiler, and other details if relevant]

I'm running this on a custom docker image on my M1 apple laptop. The docker image is based off:

FROM mcr.microsoft.com/devcontainers/cpp:0-ubuntu-20.04

I'm trying to build this for flashlight[CPU].

I'm running the code on this commit.

Additional Context

[Add any additional information here]

I ran both:

./vcpkg/vcpkg install flashlight-cpu

and:

./vcpkg install \
    intel-mkl fftw3 kenlm                              \ # for flashlight libraries
    arrayfire[cpu] gloo[mpi] openmpi onednn cereal stb \ # for the flashlight neural net library
    gflags glog                                        \ # for the flashlight runtime pkg (any flashlight apps using it)
    libsndfile                                         \ # for the flashlight speech pkg
    gtest                                                # optional, for tests

to install the packages.

I'll be happy to provide any more details if needed!

[jacobkahn]

@JinLi711 — tracking as part of vcpkg overhaul which is a work in progress.