Thomas Cokelaer

Results 66 comments of Thomas Cokelaer
trafficstars

@hadim Thanks for looking into this issue. The setup.py indicates a GPL licence. The LICENSE itself is indeed confusing. I have removed the mention to BSD and fixed the typo

> We need this to be clarified to package bioservices on conda-forge: [conda-forge/staged-recipes#14302](https://github.com/conda-forge/staged-recipes/pull/14302) Bioservices should be available on Bioconda channel itself: https://bioconda.github.io/recipes/bioservices/README.html Not sure it can be on conda-forge as...

@necoli1822 thanks for submitting this feature. Not sure I understand your request though. You used the lookfor_organism and this function returns a list with the hits of e.g. ecoli, res...

Dear @achillesrasquinha This looks like a good integration for bioservices. At the moment, at will not have the time to integrate it though. I am currently updating other services already...

hello, that quite unfortunate. commas are indeed reserved characters for URL request. I have tried a few things using urllib.parse.quote to replace the comma, I have tried to replace it...

good question ... looks like the *nbinom* distribution is available in scipy but has no method called *fit* unlike other distributions. Therefore, it is not included automatically in fitter. Maybe...

@johnnytam100 unfortunately, there was a big change in uniprot API recently, which has been updated in bioservices. So you must use the new conventions. I also recommend to use the...

First of all, thanks for using bioservices. I must agree that the error message is not very useful. I believe that molecule CHEMBL2835 does not exists hence the error message....

@AqibHasnain in the search() function, have you provided a uniprot query ? please provide a complete example and I can double check. v1.10.1 seems buggy though. I will update the...