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Add Chromoscope link to pancan_pcawg_2020

Open michandreop opened this issue 1 year ago • 2 comments

Comments

  • Created a link for every Patient ID in the clinical data to the Chromoscope website (chromoscope)
  • Used Resource Data files to link them inside the patient

michandreop avatar Aug 21 '24 19:08 michandreop

Hi @inodb! Please find the requested change under the commit with ID: [23a3c0e]

michandreop avatar Aug 29 '24 18:08 michandreop

Thanks so much @michandreop ! To fix the commit history you can generally do something like:

# get the original clone (check if git remote -v is pointing to your repo) 
git checkout origin/master -b chromoscope-fix
# cherry pick your change with the right changes
git cherry-pick 23a3c0ec136abeabc51fb759fcbc5be84bf6645a
# override your existing PR (note that your fork should be in git remote -v for this to work)
git push michandreop --force chromoscope-fix:chromoscope

We can def work with this on our end so need to change but just FYI - thought maybe helpful to know

inodb avatar Aug 30 '24 12:08 inodb

Wasn't able to push to this fork somehow, so opened a new PR: https://github.com/cBioPortal/datahub/pull/2073

inodb avatar Sep 22 '24 16:09 inodb