gnomad-browser
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broadinstitute
Explore gnomAD datasets on the web
Alicia Byrne is working to update the ClinGen gnomAD use guidance and said it would be helpful to create a help page describing the liftover feature in the browser. We...
Bumps the pip group with 13 updates in the /data-pipeline directory: | Package | From | To | | --- | --- | --- | | [tqdm](https://github.com/tqdm/tqdm) | `4.66.1` |...
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Adds one small paragraph about adding more workers to a dataproc cluster to run the computational portion of the variants pipeline in a shorter timeframe (~2 hours). I had meant...
The short variant gene pages (e.g., [PCSK9](https://gnomad.broadinstitute.org/gene/ENSG00000169174)) include a track that shows all of the ClinVar short variants within the gene. It would also be helpful to add this track...
An external user reached out to Mark for guidance on how to interpret variants that are flagged as failing our variant QC model (`AS_VQSR`). After some discussion, we came to...
A user wrote in asking about the allele numbers (AN) for this [variant](https://gnomad.broadinstitute.org/variant/3-10052405-G-A?dataset=gnomad_r4). I realized from their question that the non-UKB ANs are not being displayed when that dataset is...
**Description**: open more genes that span the inversion **Error message**: Cannot read properties of undefined (reading 'genes') **Stack trace**: ``` TypeError: Cannot read properties of undefined (reading 'genes') at B.render...
As a stop gap until we have a more complete deployctl-less pipeline, this adds a flag to deployctl that will allow developers to specify fewer replicas for demos (and for...
