Clean up repository, so that it's easier to manage.

[orowith2os]

Fixes https://github.com/bottlesdevs/components/issues/187 This still needs index.yml to be updated, and some work to be sure that it'll work.

Type of change

• [ ] New component
• [ ] Manifest fix
• [x] Other

Was this tested using a Local Repository?

• [ ] Yes
• [x] No

[orowith2os]

Bottles needs to add support for specifying a specific path for manifests to be in for this PR be merged.

[orowith2os]

https://github.com/bottlesdevs/Bottles/issues/2301