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bitnami
bitnami
[bitnami/mysql] ERROR InnoDB Cannot create redo log files.
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Name and Version
bitnami/mysql 9.3.3
What steps will reproduce the bug?
helm upgrade --install mysql -n db bitnami/mysql -f ./mysql.yaml
Are you using any custom parameters or values?
image:
registry: docker.io
repository: bitnami/mysql
tag: 8.0.30-debian-11-r15
digest: ""
pullPolicy: IfNotPresent
pullSecrets: []
debug: true
architecture: standalone
livenessProbe:
enabled: true
initialDelaySeconds: 300
periodSeconds: 10
timeoutSeconds: 1
failureThreshold: 30
successThreshold: 1
livenessProbe:
enabled: true
initialDelaySeconds: 300
periodSeconds: 10
timeoutSeconds: 1
failureThreshold: 30
successThreshold: 1
livenessProbe:
enabled: true
initialDelaySeconds: 300
periodSeconds: 10
timeoutSeconds: 1
failureThreshold: 30
successThreshold: 1
persistence:
enabled: true
storageClass: "csi-rbd-sc"
annotations: {}
accessModes:
- ReadWriteOnce
size: 12Gi
volumePermissions:
enabled: true
image:
registry: docker.io
repository: bitnami/bitnami-shell
tag: 11-debian-11-r32
digest: ""
pullPolicy: IfNotPresent
What is the expected behavior?
Up and Running MySQL
What do you see instead?
First time I have this log
mysql 17:58:15.38 Welcome to the Bitnami mysql container
mysql 17:58:15.38 Subscribe to project updates by watching https://github.com/bitnami/containers
mysql 17:58:15.39 Submit issues and feature requests at https://github.com/bitnami/containers/issues
mysql 17:58:15.39
mysql 17:58:15.40 INFO ==> ** Starting MySQL setup **
mysql 17:58:15.44 INFO ==> Validating settings in MYSQL_*/MARIADB_* env vars
mysql 17:58:15.45 INFO ==> Initializing mysql database
mysql 17:58:15.45 DEBUG ==> Ensuring expected directories/files exist
mysql 17:58:15.50 WARN ==> The mysql configuration file '/opt/bitnami/mysql/conf/my.cnf' is not writable. Configurations based on environment variables will not be applied for this file.
mysql 17:58:15.51 DEBUG ==> Cleaning data directory to ensure successfully initialization
mysql 17:58:15.52 INFO ==> Installing database
2022-09-17T17:58:15.562666Z 0 [Warning] [MY-010918] [Server] 'default_authentication_plugin' is deprecated and will be removed in a future release. Please use authentication_policy instead.
2022-09-17T17:58:15.562688Z 0 [System] [MY-013169] [Server] /opt/bitnami/mysql/bin/mysqld (mysqld 8.0.30) initializing of server in progress as process 33
2022-09-17T17:58:15.565098Z 0 [Warning] [MY-013242] [Server] --character-set-server: 'utf8' is currently an alias for the character set UTF8MB3, but will be an alias for UTF8MB4 in a future release. Please consider using UTF8MB4 in order to be unambiguous.
2022-09-17T17:58:15.565126Z 0 [Warning] [MY-013244] [Server] --collation-server: 'utf8mb3_general_ci' is a collation of the deprecated character set UTF8MB3. Please consider using UTF8MB4 with an appropriate collation instead.
2022-09-17T17:58:16.146122Z 1 [System] [MY-013576] [InnoDB] InnoDB initialization has started.
2022-09-17T18:01:56.029936Z 1 [System] [MY-013577] [InnoDB] InnoDB initialization has ended.
and after about 10 min restart container and then this error:
mysql 17:20:34.78
mysql 17:20:34.78 Welcome to the Bitnami mysql container
mysql 17:20:34.79 Subscribe to project updates by watching https://github.com/bitnami/containers
mysql 17:20:34.79 Submit issues and feature requests at https://github.com/bitnami/containers/issues
mysql 17:20:34.80
mysql 17:20:34.81 INFO ==> ** Starting MySQL setup **
mysql 17:20:34.85 INFO ==> Validating settings in MYSQL_*/MARIADB_* env vars
mysql 17:20:37.07 INFO ==> Initializing mysql database
mysql 17:20:37.08 DEBUG ==> Ensuring expected directories/files exist
mysql 17:20:37.71 WARN ==> The mysql configuration file '/opt/bitnami/mysql/conf/my.cnf' is not writable. Configurations based on environment variables will not be applied for this file.
mysql 17:20:37.72 INFO ==> Using persisted data
mysql 17:20:37.79 INFO ==> Running mysql_upgrade
mysql 17:20:37.82 INFO ==> Starting mysql in background
2022-09-17T17:20:38.299693Z 0 [Warning] [MY-011068] [Server] The syntax 'skip_slave_start' is deprecated and will be removed in a future release. Please use skip_replica_start instead.
2022-09-17T17:20:38.300062Z 0 [Warning] [MY-010918] [Server] 'default_authentication_plugin' is deprecated and will be removed in a future release. Please use authentication_policy instead.
2022-09-17T17:20:38.300118Z 0 [System] [MY-010116] [Server] /opt/bitnami/mysql/bin/mysqld (mysqld 8.0.30) starting as process 48
2022-09-17T17:20:38.307163Z 0 [Warning] [MY-013242] [Server] --character-set-server: 'utf8' is currently an alias for the character set UTF8MB3, but will be an alias for UTF8MB4 in a future release. Please consider using UTF8MB4 in order to be unambiguous.
2022-09-17T17:20:38.307199Z 0 [Warning] [MY-013244] [Server] --collation-server: 'utf8mb3_general_ci' is a collation of the deprecated character set UTF8MB3. Please consider using UTF8MB4 with an appropriate collation instead.
2022-09-17T17:20:38.321154Z 1 [System] [MY-013576] [InnoDB] InnoDB initialization has started.
2022-09-17T17:20:39.628862Z 1 [ERROR] [MY-012960] [InnoDB] Cannot create redo log files because data files are corrupt or the database was not shut down cleanly after creating the data files.
2022-09-17T17:20:40.073494Z 1 [ERROR] [MY-010334] [Server] Failed to initialize DD Storage Engine
2022-09-17T17:20:40.074385Z 0 [ERROR] [MY-010020] [Server] Data Dictionary initialization failed.
2022-09-17T17:20:40.074450Z 0 [ERROR] [MY-010119] [Server] Aborting
2022-09-17T17:20:40.076065Z 0 [System] [MY-010910] [Server] /opt/bitnami/mysql/bin/mysqld: Shutdown complete (mysqld 8.0.30) Source distribution.
Update, I change Probs valuse and mysql stuck this step:
startupProbe:
enabled: true
initialDelaySeconds: 2000
periodSeconds: 10
timeoutSeconds: 3
failureThreshold: 5
successThreshold: 1
readinessProbe:
enabled: true
initialDelaySeconds: 650
periodSeconds: 10
timeoutSeconds: 1
failureThreshold: 30
successThreshold: 1
livenessProbe:
enabled: true
initialDelaySeconds: 300
periodSeconds: 10
timeoutSeconds: 5
failureThreshold: 3
successThreshold: 1
mysql 09:29:21.81 INFO ==> ** Starting MySQL setup **
mysql 09:29:21.87 INFO ==> Validating settings in MYSQL_*/MARIADB_* env vars
mysql 09:29:21.89 INFO ==> Initializing mysql database
mysql 09:29:21.90 DEBUG ==> Ensuring expected directories/files exist
mysql 09:29:21.95 WARN ==> The mysql configuration file '/opt/bitnami/mysql/conf/my.cnf' is not writable. Configurations based on environment variables will not be applied for this file.
mysql 09:29:21.96 INFO ==> Using persisted data
mysql 09:29:22.07 INFO ==> Running mysql_upgrade
mysql 09:29:22.09 INFO ==> Starting mysql in background
2022-09-18T09:29:22.539615Z 0 [Warning] [MY-011068] [Server] The syntax 'skip_slave_start' is deprecated and will be removed in a future release. Please use skip_replica_start instead.
2022-09-18T09:29:22.539910Z 0 [Warning] [MY-010918] [Server] 'default_authentication_plugin' is deprecated and will be removed in a future release. Please use authentication_policy instead.
2022-09-18T09:29:22.539944Z 0 [System] [MY-010116] [Server] /opt/bitnami/mysql/bin/mysqld (mysqld 8.0.30) starting as process 49
2022-09-18T09:29:22.546752Z 0 [Warning] [MY-013242] [Server] --character-set-server: 'utf8' is currently an alias for the character set UTF8MB3, but will be an alias for UTF8MB4 in a future release. Please consider using UTF8MB4 in order to be unambiguous.
2022-09-18T09:29:22.546779Z 0 [Warning] [MY-013244] [Server] --collation-server: 'utf8mb3_general_ci' is a collation of the deprecated character set UTF8MB3. Please consider using UTF8MB4 with an appropriate collation instead.
2022-09-18T09:29:22.563979Z 1 [System] [MY-013576] [InnoDB] InnoDB initialization has started.
2022-09-18T09:31:03.769048Z 1 [System] [MY-013577] [InnoDB] InnoDB initialization has ended.
2022-09-18T09:31:09.786204Z 4 [System] [MY-013381] [Server] Server upgrade from '80030' to '80030' started.
Hi @DFazeli,
Did you provide the correct values? Although you are using architecture: standalone, values must be provided under primary.* in order to take effect. In this case, persistence and Probes settings would not take effect unless you provide them using primary.persistence and primary.livenessProbe.
In addition, is it possible you have data from a previous installation? In order to perform a fresh install, make sure you remove the persistent volumes from any prior installation using the same release name.
Hi @migruiz4
my Values.yaml:
global:
imageRegistry: ""
imagePullSecrets: []
storageClass: "csi-rbd-sc"
kubeVersion: ""
nameOverride: ""
fullnameOverride: ""
namespaceOverride: ""
clusterDomain: cluster.local
commonAnnotations: {}
commonLabels: {}
extraDeploy: []
diagnosticMode:
enabled: false
command:
- sleep
args:
- infinity
image:
registry: docker.io
repository: infra/mysql
tag: 8.0.30-debian-11-r15
digest: ""
pullPolicy: IfNotPresent
pullSecrets: []
debug: true
architecture: standalone
auth:
rootPassword: "123abc"
createDatabase: false
database: "my_database"
username: ""
password: ""
replicationUser: replicator
replicationPassword: ""
existingSecret: ""
usePasswordFiles: false
customPasswordFiles: {}
initdbScripts: {}
initdbScriptsConfigMap: ""
primary:
name: primary
command: []
args: []
lifecycleHooks: {}
hostAliases: []
configuration: |-
[mysqld]
default_authentication_plugin=mysql_native_password
skip-name-resolve
explicit_defaults_for_timestamp
basedir=/opt/bitnami/mysql
plugin_dir=/opt/bitnami/mysql/lib/plugin
port=3306
socket=/opt/bitnami/mysql/tmp/mysql.sock
datadir=/bitnami/mysql/data
tmpdir=/opt/bitnami/mysql/tmp
max_allowed_packet=16M
bind-address=*
pid-file=/opt/bitnami/mysql/tmp/mysqld.pid
log-error=/opt/bitnami/mysql/logs/mysqld.log
character-set-server=UTF8
collation-server=utf8_general_ci
slow_query_log=0
slow_query_log_file=/opt/bitnami/mysql/logs/mysqld.log
long_query_time=10.0
[client]
port=3306
socket=/opt/bitnami/mysql/tmp/mysql.sock
default-character-set=UTF8
plugin_dir=/opt/bitnami/mysql/lib/plugin
[manager]
port=3306
socket=/opt/bitnami/mysql/tmp/mysql.sock
pid-file=/opt/bitnami/mysql/tmp/mysqld.pid
existingConfigmap: ""
updateStrategy:
type: RollingUpdate
podAnnotations: {}
podAffinityPreset: ""
podAntiAffinityPreset: soft
nodeAffinityPreset:
type: ""
key: ""
values: []
affinity: {}
nodeSelector: {}
tolerations: []
priorityClassName: ""
schedulerName: ""
terminationGracePeriodSeconds: ""
topologySpreadConstraints: []
podManagementPolicy: ""
podSecurityContext:
enabled: true
fsGroup: 1001
containerSecurityContext:
enabled: true
runAsUser: 1001
runAsNonRoot: true
resources:
limits: {}
requests: {}
livenessProbe:
enabled: true
initialDelaySeconds: 50
periodSeconds: 10
timeoutSeconds: 5
failureThreshold: 3
successThreshold: 1
readinessProbe:
enabled: true
initialDelaySeconds: 60
periodSeconds: 10
timeoutSeconds: 1
failureThreshold: 30
successThreshold: 1
startupProbe:
enabled: true
initialDelaySeconds: 300
periodSeconds: 10
timeoutSeconds: 3
failureThreshold: 20
successThreshold: 1
customLivenessProbe: {}
customReadinessProbe: {}
customStartupProbe: {}
extraFlags: ""
extraEnvVars: []
extraEnvVarsCM: ""
extraEnvVarsSecret: ""
persistence:
enabled: true
existingClaim: ""
storageClass: "csi-rbd-sc"
annotations: {}
accessModes:
- ReadWriteOnce
size: 8Gi
selector: {}
extraVolumes: []
extraVolumeMounts: []
initContainers: []
sidecars: []
service:
type: ClusterIP
ports:
mysql: 3306
nodePorts:
mysql: ""
clusterIP: ""
loadBalancerIP: ""
externalTrafficPolicy: Cluster
loadBalancerSourceRanges: []
extraPorts: []
annotations: {}
sessionAffinity: None
sessionAffinityConfig: {}
pdb:
create: false
minAvailable: 1
maxUnavailable: ""
podLabels: {}
secondary:
name: secondary
replicaCount: 1
hostAliases: []
command: []
args: []
lifecycleHooks: {}
configuration: |-
[mysqld]
default_authentication_plugin=mysql_native_password
skip-name-resolve
explicit_defaults_for_timestamp
basedir=/opt/bitnami/mysql
plugin_dir=/opt/bitnami/mysql/lib/plugin
port=3306
socket=/opt/bitnami/mysql/tmp/mysql.sock
datadir=/bitnami/mysql/data
tmpdir=/opt/bitnami/mysql/tmp
max_allowed_packet=16M
bind-address=*
pid-file=/opt/bitnami/mysql/tmp/mysqld.pid
log-error=/opt/bitnami/mysql/logs/mysqld.log
character-set-server=UTF8
collation-server=utf8_general_ci
slow_query_log=0
slow_query_log_file=/opt/bitnami/mysql/logs/mysqld.log
long_query_time=10.0
[client]
port=3306
socket=/opt/bitnami/mysql/tmp/mysql.sock
default-character-set=UTF8
plugin_dir=/opt/bitnami/mysql/lib/plugin
[manager]
port=3306
socket=/opt/bitnami/mysql/tmp/mysql.sock
pid-file=/opt/bitnami/mysql/tmp/mysqld.pid
existingConfigmap: ""
updateStrategy:
type: RollingUpdate
podAnnotations: {}
podAffinityPreset: ""
podAntiAffinityPreset: soft
nodeAffinityPreset:
type: ""
key: ""
values: []
affinity: {}
nodeSelector: {}
tolerations: []
priorityClassName: ""
schedulerName: ""
terminationGracePeriodSeconds: ""
topologySpreadConstraints: []
podManagementPolicy: ""
podSecurityContext:
enabled: true
fsGroup: 1001
containerSecurityContext:
enabled: true
runAsUser: 1001
runAsNonRoot: true
resources:
limits: {}
requests: {}
livenessProbe:
enabled: true
initialDelaySeconds: 5
periodSeconds: 10
timeoutSeconds: 1
failureThreshold: 3
successThreshold: 1
readinessProbe:
enabled: true
initialDelaySeconds: 5
periodSeconds: 10
timeoutSeconds: 1
failureThreshold: 3
successThreshold: 1
startupProbe:
enabled: true
initialDelaySeconds: 15
periodSeconds: 10
timeoutSeconds: 1
failureThreshold: 15
successThreshold: 1
customLivenessProbe: {}
customReadinessProbe: {}
customStartupProbe: {}
extraFlags: ""
extraEnvVars: []
extraEnvVarsCM: ""
extraEnvVarsSecret: ""
persistence:
enabled: true
storageClass: "csi-rbd-sc"
annotations: {}
accessModes:
- ReadWriteOnce
size: 8Gi
selector: {}
extraVolumes: []
extraVolumeMounts: []
initContainers: []
sidecars: []
service:
type: ClusterIP
ports:
mysql: 3306
nodePorts:
mysql: ""
clusterIP: ""
loadBalancerIP: ""
externalTrafficPolicy: Cluster
loadBalancerSourceRanges: []
extraPorts: []
annotations: {}
sessionAffinity: None
sessionAffinityConfig: {}
pdb:
create: false
minAvailable: 1
maxUnavailable: ""
podLabels: {}
serviceAccount:
create: true
name: ""
annotations: {}
automountServiceAccountToken: true
rbac:
create: false
rules: []
networkPolicy:
enabled: false
allowExternal: true
explicitNamespacesSelector: {}
volumePermissions:
enabled: true
image:
registry: docker.io
repository: bitnami/bitnami-shell
tag: 11-debian-11-r32
digest: ""
pullPolicy: IfNotPresent
pullSecrets: []
resources: {}
metrics:
enabled: false
image:
registry: docker.io
repository: bitnami/mysqld-exporter
tag: 0.14.0-debian-11-r33
digest: ""
pullPolicy: IfNotPresent
pullSecrets: []
service:
type: ClusterIP
port: 9104
annotations:
prometheus.io/scrape: "true"
prometheus.io/port: "{{ .Values.metrics.service.port }}"
extraArgs:
primary: []
secondary: []
resources:
limits: {}
requests: {}
livenessProbe:
enabled: true
initialDelaySeconds: 120
periodSeconds: 10
timeoutSeconds: 1
successThreshold: 1
failureThreshold: 3
readinessProbe:
enabled: true
initialDelaySeconds: 30
periodSeconds: 10
timeoutSeconds: 1
successThreshold: 1
failureThreshold: 3
serviceMonitor:
enabled: false
namespace: ""
jobLabel: ""
interval: 30s
scrapeTimeout: ""
relabelings: []
metricRelabelings: []
selector: {}
honorLabels: false
labels: {}
annotations: {}
prometheusRule:
enabled: false
namespace: ""
additionalLabels: {}
rules: []
Hi @DFazeli,
Thank you for sharing the values.yaml
The only customization I see is the different storageClass and Probes' initialDelaySeconds set to 50.
From your logs, I have noticed that InnoDB took more than 3 minutes to initialize in a first start:
2022-09-17T17:58:16.146122Z 1 [System] [MY-013576] [InnoDB] InnoDB initialization has started.
2022-09-17T18:01:56.029936Z 1 [System] [MY-013577] [InnoDB] InnoDB initialization has ended.
And I do not see the final ** Starting MySQL ** log when Mysql finishes its first setup.
It is possible that the storageClass is too slow for the current liveness/readiness probes timers, and you may need to increase the initialDelaySeconds even more.
Below you can see the logs from a finished initialization with debug enabled:
mysql 15:01:20.23
mysql 15:01:20.24 Welcome to the Bitnami mysql container
mysql 15:01:20.24 Subscribe to project updates by watching https://github.com/bitnami/containers
mysql 15:01:20.24 Submit issues and feature requests at https://github.com/bitnami/containers/issues
mysql 15:01:20.24
mysql 15:01:20.24 INFO ==> ** Starting MySQL setup **
mysql 15:01:20.26 INFO ==> Validating settings in MYSQL_*/MARIADB_* env vars
mysql 15:01:20.27 INFO ==> Initializing mysql database
mysql 15:01:20.27 DEBUG ==> Ensuring expected directories/files exist
mysql 15:01:20.28 WARN ==> The mysql configuration file '/opt/bitnami/mysql/conf/my.cnf' is not writable. Configurations based on environment variables will not be applied for this file.
mysql 15:01:20.29 DEBUG ==> Cleaning data directory to ensure successfully initialization
mysql 15:01:20.29 INFO ==> Installing database
2022-09-22T15:01:20.309362Z 0 [Warning] [MY-010918] [Server] 'default_authentication_plugin' is deprecated and will be removed in a future release. Please use authentication_policy instead.
2022-09-22T15:01:20.309375Z 0 [System] [MY-013169] [Server] /opt/bitnami/mysql/bin/mysqld (mysqld 8.0.30) initializing of server in progress as process 33
2022-09-22T15:01:20.310379Z 0 [Warning] [MY-013242] [Server] --character-set-server: 'utf8' is currently an alias for the character set UTF8MB3, but will be an alias for UTF8MB4 in a future release. Please consider using UTF8MB4 in order to be unambiguous.
2022-09-22T15:01:20.310386Z 0 [Warning] [MY-013244] [Server] --collation-server: 'utf8mb3_general_ci' is a collation of the deprecated character set UTF8MB3. Please consider using UTF8MB4 with an appropriate collation instead.
2022-09-22T15:01:20.315800Z 1 [System] [MY-013576] [InnoDB] InnoDB initialization has started.
2022-09-22T15:01:20.643998Z 1 [System] [MY-013577] [InnoDB] InnoDB initialization has ended.
2022-09-22T15:01:21.692814Z 6 [Warning] [MY-010453] [Server] root@localhost is created with an empty password ! Please consider switching off the --initialize-insecure option.
mysql 15:01:23.81 INFO ==> Starting mysql in background
2022-09-22T15:01:24.042744Z 0 [Warning] [MY-011068] [Server] The syntax 'skip_slave_start' is deprecated and will be removed in a future release. Please use skip_replica_start instead.
2022-09-22T15:01:24.042838Z 0 [Warning] [MY-010918] [Server] 'default_authentication_plugin' is deprecated and will be removed in a future release. Please use authentication_policy instead.
2022-09-22T15:01:24.042851Z 0 [System] [MY-010116] [Server] /opt/bitnami/mysql/bin/mysqld (mysqld 8.0.30) starting as process 88
2022-09-22T15:01:24.044778Z 0 [Warning] [MY-013242] [Server] --character-set-server: 'utf8' is currently an alias for the character set UTF8MB3, but will be an alias for UTF8MB4 in a future release. Please consider using UTF8MB4 in order to be unambiguous.
2022-09-22T15:01:24.044784Z 0 [Warning] [MY-013244] [Server] --collation-server: 'utf8mb3_general_ci' is a collation of the deprecated character set UTF8MB3. Please consider using UTF8MB4 with an appropriate collation instead.
2022-09-22T15:01:24.050653Z 1 [System] [MY-013576] [InnoDB] InnoDB initialization has started.
2022-09-22T15:01:24.155616Z 1 [System] [MY-013577] [InnoDB] InnoDB initialization has ended.
2022-09-22T15:01:24.360430Z 0 [Warning] [MY-010068] [Server] CA certificate ca.pem is self signed.
2022-09-22T15:01:24.360484Z 0 [System] [MY-013602] [Server] Channel mysql_main configured to support TLS. Encrypted connections are now supported for this channel.
2022-09-22T15:01:24.379867Z 0 [System] [MY-011323] [Server] X Plugin ready for connections. Bind-address: '::' port: 33060, socket: /tmp/mysqlx.sock
2022-09-22T15:01:24.379982Z 0 [System] [MY-010931] [Server] /opt/bitnami/mysql/bin/mysqld: ready for connections. Version: '8.0.30' socket: '/opt/bitnami/mysql/tmp/mysql.sock' port: 3306 Source distribution.
mysql 15:01:25.82 DEBUG ==> Executing SQL command:
select 1
1
mysql 15:01:25.83 INFO ==> Configuring authentication
mysql 15:01:25.84 DEBUG ==> Executing SQL command:
DELETE FROM mysql.user WHERE user not in ('mysql.sys','mariadb.sys');
mysql 15:01:25.85 DEBUG ==> Configuring root user credentials
mysql 15:01:25.86 DEBUG ==> Executing SQL command:
-- create admin user
create user 'root'@'%' identified by "123abc";
grant all on *.* to 'root'@'%' with grant option;
flush privileges;
mysql 15:01:25.88 DEBUG ==> removing the unknown user
mysql 15:01:25.89 DEBUG ==> Executing SQL command:
select Host from user where User='';
mysql: [Warning] Using a password on the command line interface can be insecure.
mysql 15:01:25.92 INFO ==> Running mysql_upgrade
mysql 15:01:25.92 INFO ==> Stopping mysql
2022-09-22T15:01:25.929297Z 0 [System] [MY-013172] [Server] Received SHUTDOWN from user <via user signal>. Shutting down mysqld (Version: 8.0.30).
2022-09-22T15:01:26.791172Z 0 [System] [MY-010910] [Server] /opt/bitnami/mysql/bin/mysqld: Shutdown complete (mysqld 8.0.30) Source distribution.
mysql 15:01:26.93 DEBUG ==> Waiting for mysql to unlock db files
mysql 15:01:26.94 INFO ==> Starting mysql in background
2022-09-22T15:01:27.172314Z 0 [Warning] [MY-011068] [Server] The syntax 'skip_slave_start' is deprecated and will be removed in a future release. Please use skip_replica_start instead.
2022-09-22T15:01:27.172407Z 0 [Warning] [MY-010918] [Server] 'default_authentication_plugin' is deprecated and will be removed in a future release. Please use authentication_policy instead.
2022-09-22T15:01:27.172473Z 0 [System] [MY-010116] [Server] /opt/bitnami/mysql/bin/mysqld (mysqld 8.0.30) starting as process 196
2022-09-22T15:01:27.174446Z 0 [Warning] [MY-013242] [Server] --character-set-server: 'utf8' is currently an alias for the character set UTF8MB3, but will be an alias for UTF8MB4 in a future release. Please consider using UTF8MB4 in order to be unambiguous.
2022-09-22T15:01:27.174454Z 0 [Warning] [MY-013244] [Server] --collation-server: 'utf8mb3_general_ci' is a collation of the deprecated character set UTF8MB3. Please consider using UTF8MB4 with an appropriate collation instead.
2022-09-22T15:01:27.178640Z 1 [System] [MY-013576] [InnoDB] InnoDB initialization has started.
2022-09-22T15:01:27.272977Z 1 [System] [MY-013577] [InnoDB] InnoDB initialization has ended.
2022-09-22T15:01:27.372301Z 4 [System] [MY-013381] [Server] Server upgrade from '80030' to '80030' started.
2022-09-22T15:01:31.326390Z 4 [System] [MY-013381] [Server] Server upgrade from '80030' to '80030' completed.
2022-09-22T15:01:31.479710Z 0 [Warning] [MY-010068] [Server] CA certificate ca.pem is self signed.
2022-09-22T15:01:31.479764Z 0 [System] [MY-013602] [Server] Channel mysql_main configured to support TLS. Encrypted connections are now supported for this channel.
2022-09-22T15:01:31.493748Z 0 [System] [MY-011323] [Server] X Plugin ready for connections. Bind-address: '::' port: 33060, socket: /tmp/mysqlx.sock
2022-09-22T15:01:31.493853Z 0 [System] [MY-010931] [Server] /opt/bitnami/mysql/bin/mysqld: ready for connections. Version: '8.0.30' socket: '/opt/bitnami/mysql/tmp/mysql.sock' port: 3306 Source distribution.
find: '/docker-entrypoint-startdb.d/': No such file or directory
mysql 15:01:32.97 INFO ==> Stopping mysql
2022-09-22T15:01:32.978549Z 0 [System] [MY-013172] [Server] Received SHUTDOWN from user <via user signal>. Shutting down mysqld (Version: 8.0.30).
2022-09-22T15:01:34.475521Z 0 [System] [MY-010910] [Server] /opt/bitnami/mysql/bin/mysqld: Shutdown complete (mysqld 8.0.30) Source distribution.
mysql 15:01:34.98 DEBUG ==> Waiting for mysql to unlock db files
mysql 15:01:35.00 INFO ==> ** MySQL setup finished! **
mysql 15:01:35.02 INFO ==> ** Starting MySQL **
2022-09-22T15:01:35.265182Z 0 [Warning] [MY-010918] [Server] 'default_authentication_plugin' is deprecated and will be removed in a future release. Please use authentication_policy instead.
2022-09-22T15:01:35.265195Z 0 [System] [MY-010116] [Server] /opt/bitnami/mysql/bin/mysqld (mysqld 8.0.30) starting as process 1
2022-09-22T15:01:35.267152Z 0 [Warning] [MY-013242] [Server] --character-set-server: 'utf8' is currently an alias for the character set UTF8MB3, but will be an alias for UTF8MB4 in a future release. Please consider using UTF8MB4 in order to be unambiguous.
2022-09-22T15:01:35.267158Z 0 [Warning] [MY-013244] [Server] --collation-server: 'utf8mb3_general_ci' is a collation of the deprecated character set UTF8MB3. Please consider using UTF8MB4 with an appropriate collation instead.
2022-09-22T15:01:35.271761Z 1 [System] [MY-013576] [InnoDB] InnoDB initialization has started.
2022-09-22T15:01:35.376657Z 1 [System] [MY-013577] [InnoDB] InnoDB initialization has ended.
2022-09-22T15:01:35.555648Z 0 [Warning] [MY-010068] [Server] CA certificate ca.pem is self signed.
2022-09-22T15:01:35.555704Z 0 [System] [MY-013602] [Server] Channel mysql_main configured to support TLS. Encrypted connections are now supported for this channel.
2022-09-22T15:01:35.572859Z 0 [System] [MY-011323] [Server] X Plugin ready for connections. Bind-address: '::' port: 33060, socket: /tmp/mysqlx.sock
2022-09-22T15:01:35.572926Z 0 [System] [MY-010931] [Server] /opt/bitnami/mysql/bin/mysqld: ready for connections. Version: '8.0.30' socket: '/opt/bitnami/mysql/tmp/mysql.sock' port: 3306 Source distribution.
Hi @migruiz4. migruiz4 you are right i can't believe it, my ceph storage is very slow, i changed the StorageClass to 'nfs' and the service ran very smooth. thanks for your help.
I'm happy to hear the issue is now resolved. I will now close this issue, please let us know if you have any further issues.