bids-validator
bids-validator copied to clipboard
Warning for samples.tsv column names already defined in the standard.
trafficstars
Hi,
I get the warning below while all three columns mentioned are a required part of the standard. I get the warning, even when I use the v1.7.0 schema (using the -s v1.7.0) that includes the definition of those columns.
2: [WARN] Tabular file contains custom columns not described in a data dictionary (code: 82 - CUSTOM_COLUMN_WITHOUT_DESCRIPTION)
./samples.tsv
Evidence: Columns: sample_id, participant_id, sample_type not defined, please define in: /samples.json
I am using version 1.14.4 of the validator.
Thanks in advance, Achilleas
The attempt to incorporate schema validation into the legacy validator failed. Please test the schema validator using the instructions in
https://github.com/bids-standard/bids-validator/blob/master/bids-validator/src/README.md