Validate TSV column contents using schema.objects.columns type and format information

[effigies]

trafficstars

Example rule:

ASLCONTEXT_TSV_INCONSISTENT: In the 'sub-<label>[_ses-<label>][_acq-<label>][_rec-<label>][_run-<index>]_aslcontext.tsv', the 'volume_type' can only be filled with volumes ['cbf' ,'m0scan', 'label', 'control', 'deltam'].

From objects.columns:

volume_type:
  name: volume_type
  display_name: ASL volume type
  description: |
    The `*_aslcontext.tsv` table consists of a single column of labels identifying
    the `volume_type` of each volume in the corresponding `*_asl.nii[.gz]` file.
  type: string
  enum:
    - control
    - label
    - m0scan
    - deltam
    - cbf

[effigies]

Replaces the following issues (non-exhaustive):

• 23:TSV_EMPTY_CELL
• PARTICIPANT_ID_PATTERN
• SAMPLE_ID_PATTERN
• CHANNELS_COLUMN_TYPE
• CHANNELS_COLUMN_TYPE_UPPER_CASE
• ASLCONTEXT_TSV_INCONSISTENT

[effigies]

@rwblair I think this is done?

[rwblair]

Yup!