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Question about DRAM-v output

Open deminatanja opened this issue 1 year ago • 2 comments

Hi, I have run DRAM-v on Virsorter2 processed sequences and got amg_summary.tsv. In that output file, AMGs are listed, so to say, in two groups: some have TRUE in the potential_amg column (=gene_id_origin from genome_summary_form), while some don't (=gene_id_origin from amg_database). The latter ones have much less info in other columns as well. I am wondering if all genes listed in this output file are counted as AMGs or only the ones that have TRUE in the potential_amg column? Could you please explain or refer to where to read more about the structure of the output file? Best, Tatiana

deminatanja avatar Nov 05 '24 12:11 deminatanja