Roman Feldbauer

Sorry I never followed up on (2), because at the time it seemed the code was unreachable. If you already have an implementation @sophiamaedler, feel free to open the PR....

Likely related to https://github.com/docker/docker-py/issues/3113, work-around could be (with your alphafold venv activated) ``` bash pip3 uninstall requests pip3 install requests=2.28.1 ```

The main branch here is at v0.30. I just tested the following, which works for me: ``` bash conda create --prefix /tmp/scikit-hubness python=3.10 conda activate /tmp/scikit-hubness pip install https://github.com/VarIr/scikit-hubness/archive/main.tar.gz python3...

Thank you. So building some dependencies fails when installing an old version from PyPI. This is not entirely surprising in particular for nmslib, which hasn't been maintained since 2021 or...

With last activity in this thread nearly one year ago, I'll close this now. Feel free to open a new issue, if further questions arise.

Hi David, thanks for your interest in the package. I am not very familiar with the einsum notation, so I cannot comment on these parts. What differences do you see...

I wonder if there's really something like a "Euclidean distance version". If there is, I assume it should be something like ```python np.sqrt(squared_dist - sq_norm_dist_x - sq_norm_dist_y) ``` instead of...

Interesting. It's been a while since I last read the paper and, unfortunately, I don't really have time to look into that in much detail. If the squared Euclidean distances...

PyPI is currently only shipping the outdated v0.20.1, which requires a very old scikit-learn version, as reported in the error message. Please try to install v0.30 like so: ``` pip...

Thanks for reporting this. Indeed, the numpy aliases to Python dtypes have been removed in 1.24, [ref](https://numpy.org/doc/stable/release/1.24.0-notes.html#expired-deprecations). For the time being skhubness thus requires numpy