rnaseq-pipeline icon indicating copy to clipboard operation
rnaseq-pipeline copied to clipboard

Reorganize high-level scripts into a rnaseq-pipeline-cli tool

Open arteymix opened this issue 2 years ago • 0 comments

Tasks that should be covered via sub-commands:

  • submit experiments from a gsheet
  • submit experiments from a file
  • submit individual experiment
  • resubmit batch information
  • general luigi-wrapper task submissions (we can remove luigi-wrapper once that is finished)

This tool can be modeled on Bioluigi CLI.

arteymix avatar Oct 18 '23 20:10 arteymix