fastp version 0.23.0 and above failed to process interleaved Fastq files

[carl-]

Dr, chen, when process interleaved fastq, fastp version 0.23.0 and 0.23.1 segment fault or hangs. but using version 0.22.0 and other older versions, it works smoothly.

please verify this issue.

[asan-emirsaleh]

Hello! I have the same issue. free(): invalid pointer (core dumped) fastp --in1 ${SR1}.fastq.gz --in2 ${SR2}.fastq.gz --out1 ${SR1}.trimmed.fastq --out2 ${SR2}.trimmed.fastq --overlapped_out ${SR1}.overlaps.fastq --detect_adapter_for_pe --dup_calc_accuracy 5 --correction --overrepresentation_analysis --overrepresentation_sampling 2 --thread $THR --json fastp-report.json --html fastp-report.html

[sfchen]

Will fix it soon.

[sfchen]

fixed, please update to v0.23.2

[asan-emirsaleh]

Thank you a lot. I will try. In case I used only --out1 and --out2 without --overlapped_out reads has been processed normally.