MicrobeLab
MicrobeLab
Hi, the model checkpoint files record the current step in their names. Take a look at the files saved in the model_dir. For example, model.ckpt-10000.data-00000-of-00001 means that the model was...
Did you add seq-shuf to your path? export PATH=/path/to/DeepMicrobes/bin:$PATH If seq-shuf still fails, try installing the seq-scripts following the manual in https://github.com/thackl/seq-scripts
Hi, The first error seems to originate from data loading. It should be related to some basic process by tensorflow instead of the codes of DeepMicrobes. I'm not sure how...
Hi, you did not provide a label file.
Hi, you did not have parallel correctly installed. Try installing it using the command: (wget -O - pi.dk/3 || curl pi.dk/3/) | bash
Please check first whether parallel itself has been well installed before running our scripts. Thanks
Hello, I'm not familiar with TF2, sorry. But I found this: https://discuss.tensorflow.org/t/corresponding-function-in-tfv2-x-x/3405
Hi, I have created a release. Thank you for your effort on making DeepMicrobes available on Bioconda.
Creating a conda env is not mandatory as long as the dependencies listed in the install.yml have been provided. DeepMicrobes is not a software that needs to be compiled. It...
Hi, I created a setup.py. But I am new to building a python package. Not sure if the code works. Thanks.