How to reproduce
pytest --doctest-modules propy/Autocorrelation.py
Errors
_____________________________________________________________________________________________________ [doctest] propy.Autocorrelation.CalculateGearyAuto _____________________________________________________________________________________________________
383 -------
384 result contains 30*p Geary autocorrelation descriptors based on the given
385 properties.
386
387 Examples
388 --------
389 >>> from propy.GetProteinFromUniprot import GetProteinSequence
390 >>> protein = GetProteinSequence(ProteinID="Q9NQ39")
391 >>> AAP, AAPName = _Hydrophobicity, "_Hydrophobicity"
392 >>> result = CalculateGearyAuto(protein, AAP, AAPName)
UNEXPECTED EXCEPTION: KeyError(0)
Traceback (most recent call last):
File "/home/moose/.pyenv/versions/3.8.1/lib/python3.8/doctest.py", line 1329, in __run
exec(compile(example.source, filename, "single",
File "<doctest propy.Autocorrelation.CalculateGearyAuto[3]>", line 1, in <module>
File "/home/moose/GitHub/propy3/propy/Autocorrelation.py", line 397, in CalculateGearyAuto
ProteinSequence, AAProperty[i], AAPropertyName[i]
KeyError: 0
/home/moose/GitHub/propy3/propy/Autocorrelation.py:392: UnexpectedException
_____________________________________________________________________________________________________ [doctest] propy.Autocorrelation.CalculateMoranAuto _____________________________________________________________________________________________________
348 -------
349 result contains 30*p Moran autocorrelation descriptors based on the given
350 properties.
351
352 Examples
353 --------
354 >>> from propy.GetProteinFromUniprot import GetProteinSequence
355 >>> protein = GetProteinSequence(ProteinID="Q9NQ39")
356 >>> AAP, AAPName = _Hydrophobicity, "_Hydrophobicity"
357 >>> result = CalculateMoranAuto(protein, AAP, AAPName)
UNEXPECTED EXCEPTION: KeyError(0)
Traceback (most recent call last):
File "/home/moose/.pyenv/versions/3.8.1/lib/python3.8/doctest.py", line 1329, in __run
exec(compile(example.source, filename, "single",
File "<doctest propy.Autocorrelation.CalculateMoranAuto[3]>", line 1, in <module>
File "/home/moose/GitHub/propy3/propy/Autocorrelation.py", line 362, in CalculateMoranAuto
ProteinSequence, AAProperty[i], AAPropertyName[i]
KeyError: 0
/home/moose/GitHub/propy3/propy/Autocorrelation.py:357: UnexpectedException
_____________________________________________________________________________________________ [doctest] propy.Autocorrelation.CalculateNormalizedMoreauBrotoAuto _____________________________________________________________________________________________
314 -------
315 result contains 30*p Normalized Moreau-Broto autocorrelation descriptors
316 based on the given properties.
317
318 Examples
319 --------
320 >>> from propy.GetProteinFromUniprot import GetProteinSequence
321 >>> protein = GetProteinSequence(ProteinID="Q9NQ39")
322 >>> AAP, AAPName = _Hydrophobicity, "_Hydrophobicity"
323 >>> result = CalculateNormalizedMoreauBrotoAuto(protein, AAP, AAPName)
UNEXPECTED EXCEPTION: KeyError(0)
Traceback (most recent call last):
File "/home/moose/.pyenv/versions/3.8.1/lib/python3.8/doctest.py", line 1329, in __run
exec(compile(example.source, filename, "single",
File "<doctest propy.Autocorrelation.CalculateNormalizedMoreauBrotoAuto[3]>", line 1, in <module>
File "/home/moose/GitHub/propy3/propy/Autocorrelation.py", line 328, in CalculateNormalizedMoreauBrotoAuto
ProteinSequence, AAProperty[i], AAPropertyName[i]
KeyError: 0
/home/moose/GitHub/propy3/propy/Autocorrelation.py:323: UnexpectedException