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"synonym" show both exact and no-exact synonym

Open sabrinatoro opened this issue 2 years ago • 4 comments
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The synonyms shown on a term page include both exact and non-exact synonyms, and there is no indication on which one is exact or not. This is confusing and misleading.

For examples: Alzheimer disease : "Alzheimer disease, familial" is a "narrow synonym" in Mondo, and should not be considered exact

hemangioma : 'angioma' and 'benigh angioma' are 'related synonym' and should not be considered exact.

Proposal:

  • Only show exact synonym in the term box on top of the page
  • show the not-exact synonym in the "class information" on the right side of the page.

sabrinatoro avatar May 24 '23 21:05 sabrinatoro

#369

henrietteharmse avatar Jul 26 '23 10:07 henrietteharmse

Any progress on this? Synonym scopes are used broadly by many OBO ontologies - GO, Mondo, Uberon, ENVO, CL, ...

OLS shows axiom annotations on mouseover which is great, but the actual predicate is 100x more important for most people!!

Also I think this is unrelated to 369 which can be closed.

cmungall avatar Jul 26 '24 03:07 cmungall

Thanks for resurfacing this! Very important indeed!

matentzn avatar Jul 26 '24 04:07 matentzn

Any progress on this? It would be a very useful feature.

sbello avatar Aug 29 '24 16:08 sbello

Bumping the importance of this again, I have a lot of discussions with curators that are confused by this!

matentzn avatar Nov 09 '24 16:11 matentzn

Fixed in OLS now. Synonym would appear as they are curated in ontology file Screenshot 2024-11-26 at 12 34 52

haideriqbal avatar Nov 26 '24 12:11 haideriqbal

this is awesome thank you @haideriqbal

matentzn avatar Nov 26 '24 13:11 matentzn