maui

maui copied to clipboard

Fails to install with pipenv

1

Perhaps it's time to extend support to python > 3.6?

jonathanronen

Bumps [scipy](https://github.com/scipy/scipy) from 1.2.1 to 1.10.0. Release notes Sourced from scipy's releases. SciPy 1.10.0 Release Notes SciPy 1.10.0 is the culmination of 6 months of hard work. It contains many...

dependabot[bot]

fail to run the example code

3

when I run the code "time z = maui_model.fit_transform({'mRNA': gex, 'Mutations': mut, 'CNV': cnv})",I get the error : TypeError: compile() missing 1 required positional argument: 'loss' Could you know where...

wangqiqi1995

I can't reproduce vignette results

1

[maui_vignette.zip](https://github.com/BIMSBbioinfo/maui/files/4133944/maui_vignette.zip) I like maui and explore the possibility of VAEs in a cancer subtyping project, but I am having a hard time to reproduce your vignette results. The issue arises...

grokkaine

``` lib/python3.6/site-packages/sklearn/base.py:420: FutureWarning: The default value of multioutput (not exposed in score method) will change from 'variance_weighted' to 'uniform_average' in 0.23 to keep consistent with 'metrics.r2_score'. To specify the default...

jonathanronen

scipy 1.3 introduced a rewrite of `stats.pearsonr` [1] which broke the `test_utils.test_correlate_factors_and_features` test. This needs to be investigated - should only the test be rewritten, or the whole "feature correlations"...

jonathanronen