pytorch_fnet issues

bug-fix/NaN error in examples

**Pull request recommendations:** - [ ] Name your pull request _your-development-type/short-description_. Ex: _feature/read-tiff-files_ - [ ] Link to any relevant issue in the PR description. Ex: _Resolves [gh-12], adds tiff...

zsdqui

download_and_train does not train the model

## Description it takes just a few seconds to run download_and_train.py. Also, when I run predict.py it takes just a few seconds. predicted images aren't saved either. so, I don't...

Surabhiad

torch.Size([1, 7, 624, 924]) incompatible with patch_shape [32, 64, 64]

3

ValueError: Dataset item 13, component 0 shape torch.Size([1, 7, 624, 924]) incompatible with patch_shape [32, 64, 64] Hello, I am trying to train Your network on the tom20 mitochondrium stained...

michalstepniewski

Integer to NaN error with download_and_train.py

1

## Description Trying to successfully install+test the latest version of the repo. Initially, I was hitting versioning errors if I just set the environment using: conda create --name python=3.6 So,...

mattpharris

Could not train the model on AWS

2

I was trying to use the pytorch_fnet on an amazon EC2 instance (I used a g4 instance). When I run the `download_and_train.py`, it always gives me: `_mkl-service + Intel(R) MKL_...

Li-En-Good

Training example issues with csv creation

2

Issues corresponding to trying to use the examples/download_and_train.py. This has been specifically tested when trying to run this example in a google colab notebook, so some issues may be specific...

SamPIngram

Which of your training data would you recommend for segmenting cell cytoplasm from intercellular substance/glass?

6

Hello, I did the tutorial and after 50k steps fnet is able to 'in-silico' label the nuclei. However my use case is that I want to be able to segment...

michalstepniewski

GPU memory allocation

5

Hi Whenever I try to run the following code after installing: `python predict.py` Then I get the following error: `RuntimeError: CUDA out of memory. Tried to allocate 1024.00 MiB (GPU...

siewerthug