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Trying to open a .rcpnl file with this plugin and Napri closes

Open bluesupermn4 opened this issue 1 year ago • 2 comments
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Hello I am running Napari with the aicsimageio plugin on a Windows 10 64 bit OS

napari: 0.5.3 Platform: Windows-10-10.0.19041-SP0 Python: 3.9.0 (tags/v3.9.0:9cf6752, Oct 5 2020, 15:34:40) [MSC v.1927 64 bit (AMD64)] Qt: 5.15.2 PyQt5: 5.15.11 NumPy: 1.24.4 SciPy: 1.9.1 Dask: 2024.8.0 VisPy: 0.14.3 magicgui: 0.9.1 superqt: 0.6.7 in-n-out: 0.2.1 app-model: 0.2.8 npe2: 0.7.7

OpenGL:

  • GL version: 4.6.0 - Build 30.0.100.9864
  • MAX_TEXTURE_SIZE: 16384
  • GL_MAX_3D_TEXTURE_SIZE: 2048

Screens:

  • screen 1: resolution 2560x1440, scale 1.0

Optional:

  • numba: 0.60.0
  • triangle: 20230923
  • napari-plugin-manager: 0.1.0

When I try to open my .rcpnl file with this plugin and Napri closes and I am left with the following message in the CMD window

Assistant skips harvesting pyclesperanto as it's not installed.

bluesupermn4 avatar Oct 16 '24 21:10 bluesupermn4

Hello!

This library is currently migrating to bioio (aicsimageio rebranded and upgraded).

See this issue: https://github.com/AllenCellModeling/napari-aicsimageio/issues/82

Random napari application closures should be solved by installing napari-aicsimageio from source via the switch-to-bioio branch.

After installing from that branch, install support for rcpnl with pip install bioio-bioformats


Sorry you are having this issue, I don't have a lot of time but I am trying to get this library upgraded when I can. If possible please try my recommendations above.

I will leave this issue open until the repository is fully upgraded in case others happen to see this issue and are experiencing similar bugs

evamaxfield avatar Oct 17 '24 15:10 evamaxfield

@evamaxfield Im happy to help out how I can. Feel free to reach out on napari Zulip! ❤️

psobolewskiPhD avatar Oct 17 '24 17:10 psobolewskiPhD