napari-aicsimageio
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Trying to open a .rcpnl file with this plugin and Napri closes
Hello I am running Napari with the aicsimageio plugin on a Windows 10 64 bit OS
napari: 0.5.3 Platform: Windows-10-10.0.19041-SP0 Python: 3.9.0 (tags/v3.9.0:9cf6752, Oct 5 2020, 15:34:40) [MSC v.1927 64 bit (AMD64)] Qt: 5.15.2 PyQt5: 5.15.11 NumPy: 1.24.4 SciPy: 1.9.1 Dask: 2024.8.0 VisPy: 0.14.3 magicgui: 0.9.1 superqt: 0.6.7 in-n-out: 0.2.1 app-model: 0.2.8 npe2: 0.7.7
OpenGL:
- GL version: 4.6.0 - Build 30.0.100.9864
- MAX_TEXTURE_SIZE: 16384
- GL_MAX_3D_TEXTURE_SIZE: 2048
Screens:
- screen 1: resolution 2560x1440, scale 1.0
Optional:
- numba: 0.60.0
- triangle: 20230923
- napari-plugin-manager: 0.1.0
When I try to open my .rcpnl file with this plugin and Napri closes and I am left with the following message in the CMD window
Assistant skips harvesting pyclesperanto as it's not installed.
Hello!
This library is currently migrating to bioio (aicsimageio rebranded and upgraded).
See this issue: https://github.com/AllenCellModeling/napari-aicsimageio/issues/82
Random napari application closures should be solved by installing napari-aicsimageio from source via the switch-to-bioio branch.
After installing from that branch, install support for rcpnl with pip install bioio-bioformats
Sorry you are having this issue, I don't have a lot of time but I am trying to get this library upgraded when I can. If possible please try my recommendations above.
I will leave this issue open until the repository is fully upgraded in case others happen to see this issue and are experiencing similar bugs
@evamaxfield Im happy to help out how I can. Feel free to reach out on napari Zulip! ❤️